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https://hdl.handle.net/2440/70370
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Type: | Journal article |
Title: | Ty-1 copia retrotransposon-based SSAP marker development in Cashew (Anacardium occidentale L.) |
Author: | Syed, N. Sureshsundar, S. Wilkinson, M. Bhau, B. Cavalcanti, J. Flavell, A. |
Citation: | Theoretical and Applied Genetics: international journal of plant breeding research, 2005; 110(7):1195-1202 |
Publisher: | Springer |
Issue Date: | 2005 |
ISSN: | 0040-5752 1432-2242 |
Statement of Responsibility: | N. H. Syed, S. Sureshsundar, M. J. Wilkinson, B. S. Bhau, J. J. V. Cavalcanti, A. J. Flavell |
Abstract: | The most popular retrotransposon-based molecular marker system in use at the present time is the sequence-specific amplification polymorphism (SSAP) system . This system exploits the insertional polymorphism of long terminal repeat (LTR) retrotransposons around the genome. Because the LTR sequence is used to design primers for this method, its successful application requires sequence information from the terminal region of the mobile elements . In this study, two LTR sequences were isolated from the cashew genome and used successfully to develop SSAP marker systems. These were shown to have higher levels of polymorphism than amplified fragment length polymorphic markers for this species. |
Keywords: | Anacardium Retroelements DNA Primers Genetic Markers Nucleic Acid Amplification Techniques Polymerase Chain Reaction Sequence Analysis, DNA Amino Acid Sequence Base Sequence Terminal Repeat Sequences Polymorphism, Genetic Polymorphism, Restriction Fragment Length Gene Components Molecular Sequence Data |
Rights: | © Springer-Verlag 2005 |
DOI: | 10.1007/s00122-005-1948-1 |
Published version: | http://dx.doi.org/10.1007/s00122-005-1948-1 |
Appears in Collections: | Agriculture, Food and Wine publications Aurora harvest |
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